You get a little over five and a half minutes (342.95 seconds) at 2412 EU/t before the coolant cells pop in the Computer Cube (running 3.06d Gregtech over 1.115.336-lf IC2), which is... pretty nice. By comparison, Thick Neutron Reflectors return 2400EU/t for 343 seconds. Thorium definitely makes more sense, both from a cost and performance perspective. Not sure if the heat vents make much sense on the corners, or if there's anything that can go in those slots meaningfully -- I'm seeing less than a seconds of difference between heat vents and empty space.
The heat vents in the corners are there to disperse heat created by the thorium cells. Cooling cells can only absorb heat from any fissionable material thats directly next to them, meaning the heat from the thorium would otherwise have nowhere to go other than into the reactor hull, with explosive results.
The thorium isn't really there for extra power, its just acting as cheap neutron reflectors.