If you place a pillar of scaffolds and reach maximum height (256) and left click the pillar to try placing another above it will consume a scaffold without placing any block.
Both Iron and Wooden scaffolds are bugged.
Bug : Scaffold placement with left-click
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I guess you found that out, while building the new Windtowerdesign i suggested to you.
Arrrgh, i remember that this Bug is also happened to me! I forgot to report it.
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Actually i found this bug much time ago, but was too lazy to post. While building wind towers made me remember this bug, now i just posted it instead of doing nothing, as it is a minor bug.